pybind/mgr/dashboard: bump flake8 to 3.9.0

pybind/mgr/dashboard: bump flake8 to 3.9.0

to address the failure of

ERROR: Cannot install -r requirements-lint.txt (line 2) and -r requirements-lint.txt (line 8) because these package versions have conflicting dependencies.

The conflict is caused by:
    flake8 3.8.4 depends on pycodestyle<2.7.0 and >=2.6.0a1
    autopep8 1.5.6 depends on pycodestyle>=2.7.0

To fix this you could try to:
1. loosen the range of package versions you've specified
2. remove package versions to allow pip attempt to solve the dependency conflict

also, loosen the version of pytest:

The conflict is caused by:
    The user requested pytest<4
    The user requested pytest<4
    pytest-cov 2.11.1 depends on pytest>=4.6

To fix this you could try to:
1. loosen the range of package versions you've specified
2. remove package versions to allow pip attempt to solve the dependency
   conflict

Signed-off-by: Kefu Chai <kchai@redhat.com>
(cherry picked from commit 152964ca360293d9accd18f435efcd66d145063e)